Bookmark and Share

Notice: On March 31, it was announced that Statalist is moving from an email list to a forum. The old list will shut down at the end of May, and its replacement, statalist.org is already up and running.


[Date Prev][Date Next][Thread Prev][Thread Next][Date Index][Thread Index]

Re: st: RE: New package -wridit- on SSC


From   "Roger B. Newson" <r.newson@imperial.ac.uk>
To   statalist@hsphsun2.harvard.edu
Subject   Re: st: RE: New package -wridit- on SSC
Date   Tue, 28 Feb 2012 18:14:58 +0000

As it happens, there is an alternative fudge. You can contatenate the reference-population dataset (with its values and weights) to the end of your sample dataset using -append-, and then assign zero weights to the observations from your original sample dataset. If you then use -wridit-, then the ridits generated, in observations from the original sample dataset, will all be relative to the identified distribution defined by the weights in the reference-population dataset. You can then discard the observations from the reference-population dataset.

Best wishes

Roger


Roger B Newson BSc MSc DPhil
Lecturer in Medical Statistics
Respiratory Epidemiology and Public Health Group
National Heart and Lung Institute
Imperial College London
Royal Brompton Campus
Room 33, Emmanuel Kaye Building
1B Manresa Road
London SW3 6LR
UNITED KINGDOM
Tel: +44 (0)20 7352 8121 ext 3381
Fax: +44 (0)20 7351 8322
Email: r.newson@imperial.ac.uk
Web page: http://www.imperial.ac.uk/nhli/r.newson/
Departmental Web page:
http://www1.imperial.ac.uk/medicine/about/divisions/nhli/respiration/popgenetics/reph/

Opinions expressed are those of the author, not of the institution.

On 28/02/2012 16:41, Seed, Paul wrote:
Thanks as ever to Roger&  Nick for their work on this.
I went back to the original article by Bross to try to understand what ridits were:
Bross, I. D. J.  1958.  How to use ridit analysis.  Biometrics 14: 38-58.
http://www.jstor.org/stable/2527727

The name ridit actually derives by analogy from probit and logit,
and is in part "Relative to an Identified Distribution".
Neither -wridit- not -egen , ridit()- have options to specify the identified distribution,
as Bross intended.

However, it is possible to fudge it:
Assume I want ridits for rep78 in the auto dataset, and want to use the US subsample
as my Identified Distribution (or reference distribution).

**************************
* Begin example analysis *
**************************
sysuse auto, clear
egen ridit_rep78_usa  = ridit( rep78) if foreign == 0
bys rep78 (foreign) : replace ridit_rep78_usa  =  ridit_rep78_usa[1] if foreign[1] == 0
bys foreign : summ ridit_rep78_usa

* Contrast this with using all the data as the reference group:

egen ridit_rep78 = ridit( rep78)
bys foreign : summ ridit_rep78

* The means have shifted by a fixed amount, and the SD have changed slightly.

**************************
*  End example analysis  *
**************************

Roger B. Newson

Thanks as always to Kit Baum, a new package -wridit- is now available
for download from SSC. In Stata, use the -ssc- command to do this.

The -wridit- package is described as below on my website, and calculayes
weighted ridits for a variable. Zero weights are allowed, in which case
the ridits for the observations with zero weights are relative to the
weight distribution in the observations with non-zero weights. Ridits,
and the left, right and central inverse ridits, are important in rank
statistics, which, strictly speaking, are really ridit statistics. They
are also potentially useful in spline statistics, where the user might
want to define a spline in the ridit of an X-variable, instead of in the
X-variable itself.

I would like to thank Nick Cox for writing the -ridit()- function of the
-egenmore- package, which generates unweighted ridits, and from which I
borrowed a few ideas for -wridit-. I slightly revised the algorithm for
-wridit-, in order to avoid the small numerical accuracy issues
associated with adding a small probability to a large probability.

---------------------------------------------------------------------------
package wridit from http://www.imperial.ac.uk/nhli/r.newson/stata10
---------------------------------------------------------------------------

TITLE
         wridit: Generate weighted ridits

DESCRIPTION/AUTHOR(S)
         wridit inputs a variable and generates its weighted ridits.
         If no weights are provided, then all weights are assumed
         equal to 1, so unweighted ridits are generated.

         Author: Roger Newson
         Distribution-Date: 22february2012
         Stata-Version: 10

INSTALLATION FILES                                  (click here to install)
         wridit.ado
         wridit.sthlp
---------------------------------------------------------------------------
(click here to return to the previous screen)


*
*   For searches and help try:
*   http://www.stata.com/help.cgi?search
*   http://www.stata.com/support/statalist/faq
*   http://www.ats.ucla.edu/stat/stata/
*
*   For searches and help try:
*   http://www.stata.com/help.cgi?search
*   http://www.stata.com/support/statalist/faq
*   http://www.ats.ucla.edu/stat/stata/


© Copyright 1996–2014 StataCorp LP   |   Terms of use   |   Privacy   |   Contact us   |   Site index