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st: Haplotype Estimation


From   "Andrea Baccarelli" <andreastata5@hotmail.com>
To   statalist@hsphsun2.harvard.edu
Subject   st: Haplotype Estimation
Date   Tue, 19 Aug 2003 00:25:07 +0000

Two questions related to the estimation of haplotypes from genotype data from phase uncertainty:

1. Schaid (Am J Hum Gen 2002) proposed the use of the score test for assessing the association between haplotype data estimated using the EM-algorithm and any given trait assessed in the same subject. Does Stata allow to perform a Score test?

2. Is there any way to perform the such Score test using the command qhapipf?

Thanks,
Andrea

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