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re: st: genhw error
.
I am not seeing the same problem with genhw. I'm Stata MP OS X.
-Dave
. which genhw
/Users/dairey/Library/Application Support/Stata/ado/plus/g/genhw.ado
*! version 7.0.0 14mar2005
. codebook her2_189187_1 her2_189187_2
------------------------------------------------------------------------
--------
her2_189187_1
HER2_189187_1
------------------------------------------------------------------------
--------
type: string (str1)
unique values: 2 missing "": 35/2394
tabulation: Freq. Value
35 ""
1940 "C"
419 "T"
------------------------------------------------------------------------
--------
her2_189187_2
HER2_189187_2
------------------------------------------------------------------------
--------
type: string (str1)
unique values: 2 missing "": 35/2394
tabulation: Freq. Value
35 ""
883 "C"
1476 "T"
. genhw her2_189187_1 her2_189187_2
Genotype | Observed Expected
------------+-----------------------------
CC | 871 844.57
CT | 1081 1133.87
TT | 407 380.57
------------+-----------------------------
total | 2359 2359.00
Allele | Observed Frequency Std. Err.
------------+--------------------------------------
C | 2823 0.5983 0.0073
T | 1895 0.4017 0.0073
------------+--------------------------------------
total | 4718 1.0000
Estimated disequilibrium coefficient (D) = 0.0112
Hardy-Weinberg Equilibrium Test:
Pearson chi2 (1) = 5.128 Pr= 0.0235
likelihood-ratio chi2 (1) = 5.118 Pr= 0.0237
Exact significance prob = 0.0233
*
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